Insertion junction: CLIP2.022696_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022696
Chromosome:chromosome 17
Location:130194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g696750 (1 of 4) IPR001005//IPR006447//IPR009057//IPR017930 - SANT/Myb domain // Myb domain, plants // Homeodomain-like // Myb domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCTGCCGCACTTGTGCCGAACCACCGTGGTGACGGCTCGGCTGCACAG
Internal bar code:TTGTGTGCCCCTTAGTACATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1177
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGTTGTTGACATCGCA
Suggested primer 2:GTCTGCAGTTTCACAAGCGG