Insertion junction: CLIP2.022696_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022696
Chromosome:chromosome 17
Location:130204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g696750 (1 of 4) IPR001005//IPR006447//IPR009057//IPR017930 - SANT/Myb domain // Myb domain, plants // Homeodomain-like // Myb domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATTCTGGGCCTGGGTCTGTGAGTGCTGCTGCGGTACCGGCGCCAGGG
Internal bar code:TTGTGTGCCCCTTAGTACATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2905
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGCAGTTTCACAAGCGG
Suggested primer 2:GTGCTGTTGTTGACATCGCA