Insertion junction: CLIP2.022704_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022704
Chromosome:chromosome 5
Location:3341375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232600 (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCATGGGGAGCCAGCAAGTACGCCGGTTTGTGTGTTGACAACAGGA
Internal bar code:TAACTGCAGTGGCACGGTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:252
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGGGGTGAGTCCATTTC
Suggested primer 2:CAACAATTGGAGCAACGCCA