Insertion junction: CLIP2.022705_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022705
Chromosome:chromosome 3
Location:7861061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202750 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACTACGGGCAGCGGAAGCAGTGGGAGCGTCTCGAGGCTGGGCCGGATG
Internal bar code:ATGGGATAAGCTTGACCTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2351
LEAP-Seq percent confirming:46.5517
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAATCTCCAACCCACCC
Suggested primer 2:AACACACCTCAGCTCTCGTG