Insertion junction: CLIP2.022710_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022710
Chromosome:chromosome 7
Location:2417954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328850 CNK8 NimA-related protein kinase; (1 of 1) PTHR24361:SF240 - PROTEIN MTK-1, ISOFORM B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTGACGACAGCAAGTCTTGTCCTTGCGCCCGCCGGTCCCCACCTCCA
Internal bar code:AGGTTGCAATACCCTTGATCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1679
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGTTGCAAGAGGGCATC
Suggested primer 2:ATGCTGTAGCGCCTTTGTCT