Insertion junction: CLIP2.022722_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022722
Chromosome:chromosome 12
Location:5166499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g526850 HEL56 (1 of 1) K14810 - ATP-dependent RNA helicase DDX56/DBP9 [EC:3.6.4.13] (DDX56, DBP9); DEAD box ATP-dependent RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCTCACCCTGCCTGCACCCACCCACCCACCACCATCACCACCATCAC
Internal bar code:AAAGCTTACTACCTTTCTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1380
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCTATTCCGTCCTCCAC
Suggested primer 2:GAGGCCTCACAGCATCCTTT