Insertion junction: CLIP2.022744_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022744
Chromosome:chromosome 6
Location:8332036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307350 (1 of 2) K12486 - stromal membrane-associated protein (SMAP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATGTTTGTGAGTGGCTGCGTCATAACGAGGCCAGCAGCACTATCACT
Internal bar code:CGTCTTACGGGGCGGGACCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:634
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCCTACGCTTGCAACTA
Suggested primer 2:TGATGTAGACCGCAGCGATC