Insertion junction: CLIP2.022749_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022749
Chromosome:chromosome 17
Location:2129356
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711850 HTR5,HTR19,HTR30 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGACCGACCTGCGCTTCCAGAGCCAGGCCGTGCTGGCGCTGCAGGAG
Internal bar code:TAAATGGCGAGCACGGGCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1762
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGCTCAATTCCTCCCAC
Suggested primer 2:CTTGGTGATGCCCTGGATGT