Insertion junction: CLIP2.022749_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022749
Chromosome:chromosome 17
Location:2129359
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711850 HTR5,HTR19,HTR30 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGTCCTGGGCAATCTCACGGACCAGGCGCTGGAACGGCAGCTTGCGG
Internal bar code:GCTAATTCTGGAGTCCTAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5855
LEAP-Seq percent confirming:90.2174
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGTGATGCCCTGGATGT
Suggested primer 2:AGCTGCTCAATTCCTCCCAC