Insertion junction: CLIP2.022757_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022757
Chromosome:chromosome 3
Location:4179967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173300 (1 of 6) IPR007577//IPR029044 - Glycosyltransferase, DXD sugar-binding motif // Nucleotide-diphospho-sugar transferases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGACGCGCCGGGCTGCTCGGGCCGGGGCCACGACGAAGACAAGCACCG
Internal bar code:TGTTGTCAAATATATGGTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3382
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGGCATTCCTTCTGACG
Suggested primer 2:CAACTGAACTTGTGGCTGGC