Insertion junction: CLIP2.022770_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022770
Chromosome:chromosome 17
Location:3405033
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723300 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGTAGGGACTGACGTCCGTACGTCCTCCTCACCTGGCTAGGTCGTGC
Internal bar code:TCAGAACGGAAATATGCTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2342
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCAGATGGGGTTTCTGG
Suggested primer 2:TGTACCAGTGCGAGGACAAC