Insertion junction: CLIP2.022773_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022773
Chromosome:chromosome 2
Location:3073060
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095900 ROC114,ROC108 Rhythm Of Chloroplast 114; (1 of 13) PF00646 - F-box domain (F-box) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCGCAGCTGACCAGCCAGCCTGGTCATGCGGCTGCCTCTCTCCCCAG
Internal bar code:ATATCATAAAGTTGATAACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:181
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCATCATCCGCGAGTTCG
Suggested primer 2:TGAACACGTGGTACAGACGG