Insertion junction: CLIP2.022777_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022777
Chromosome:chromosome 2
Location:4147652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g103770 3'UTR
Cre02.g103784 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAAAGGCGTGTTGCAAATCCCGCCCCACCCTCGTGCTCTCTTCCAAG
Internal bar code:TCAGATCTGTAAGGCTGACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1217
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTATTTGCAACGTCGAGCCG
Suggested primer 2:TCGCTCAAGATCGGTCGATG