Insertion junction: CLIP2.022786_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022786
Chromosome:chromosome 5
Location:2993487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00229754

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGACCTTCCAGCGTGTGCAGTGCACCGCGGACCTTCTGGGGTCGTAGC
Internal bar code:AGTCAGTACATCGCTTGATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1926
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCACGACCCGTTCAAGAA
Suggested primer 2:GCACAATCAACGGCCACTTT