Insertion junction: CLIP2.022792_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022792
Chromosome:chromosome 12
Location:3357907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498350 RBM25,SRE1,SRS7 Pre-mRNA splicing factor, SR-related; (1 of 1) K13168 - splicing factor, arginine/serine-rich 16 (SFRS16) intron
Cre12.g498400 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGCATTCCAGCCACGGCGGGCGCACCCACCTGGCCCCCGAACCCAGG
Internal bar code:ATTCGGAATAGCGCGGTTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3237
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTAGGCTGTGTGTTCTGT
Suggested primer 2:ATATGTATGCCGCAGACGCA