Insertion junction: CLIP2.022796_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022796
Chromosome:chromosome 3
Location:288574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144424 (1 of 5) PTHR32467//PTHR32467:SF15 - FAMILY NOT NAMED // AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCTGGATCTGGGGCTGGGGCTGGGGCTGGAGGAGGGTGCACCGGGCG
Internal bar code:TGTCTCGAACCGAAAAGTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2712
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCAAGCTCCCAAAGTCC
Suggested primer 2:CGCAGCTGCAGCATTAGATG