Insertion junction: CLIP2.022801_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022801
Chromosome:chromosome 13
Location:4590694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603550 5'UTR/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGACCAGCCTAGTCCACGGCTCGGGTCTGTCAGCATCTCGCAATGC
Internal bar code:ACACATGGTAGAAAGGTAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1492
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGGACATATGGATTGGA
Suggested primer 2:TGAGGGAAGGACGGAGGTAG