Insertion junction: CLIP2.022807_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.022807
Chromosome:chromosome 3
Location:3463945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167050 PDX3 Pyridoxin biosynthesis protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGACGCTGTACTCCACAAGCGCCGCCACGACGCGCTCGGCTCCGGCC
Internal bar code:AGTCCCCCTATTTCGATTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:4035
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAGGTGAACATGACACG
Suggested primer 2:ACACCAACGCGAATCCTAGG