Insertion junction: CLIP2.022807_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022807
Chromosome:chromosome 3
Location:3463945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167050 PDX3 Pyridoxin biosynthesis protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCGTCAGCGGTGCCGAGCAGGGACATGGCGCTCGCGGAGTTTCGGTGG
Internal bar code:TATTTTATCTTGTTTACGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1706
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCAACGCGAATCCTAGG
Suggested primer 2:TGGGAGGTGAACATGACACG