Insertion junction: CLIP2.022808_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.022808
Chromosome:chromosome 12
Location:6148193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535400 (1 of 1) IPR000104//IPR003590//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGAGCACTCTGATTCGTACTGGTGCAAGTCATTTCCAATGCGCGAGGT
Internal bar code:ATGTGCGTTCGCTGGCCTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4407
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTAATGGGTGATGGGGC
Suggested primer 2:GCCTTGTCTCATTGCTCCCT