Insertion junction: CLIP2.022818_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022818
Chromosome:chromosome 10
Location:2063613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432650 (1 of 1) 3.6.1.59 - 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase / M(7)GpppX pyrophosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTTATCCCCTCGCGCACTCGCGCTCGCGCTCGCACTCGCACCAATCG
Internal bar code:AGATGATTTCAGAGAGCGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1525
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTACTCCTGCTCCTGCTA
Suggested primer 2:AGAGGTGGAGCGACTGATCT