Insertion junction: CLIP2.022829_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.022829
Chromosome:chromosome 3
Location:3493954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167250 (1 of 1) PF05673 - Protein of unknown function (DUF815) (DUF815) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCGCGCCAGATACCGTCCCGCCCGAAACCCTACCGCCCCCACCATAT
Internal bar code:GGGTACGTTCCGTTTTTTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:434
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGATGCGGTGGAAATTG
Suggested primer 2:TTCCGGCGATGTGTTCTTCA