Insertion junction: CLIP2.022829_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022829
Chromosome:chromosome 3
Location:3493957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167250 (1 of 1) PF05673 - Protein of unknown function (DUF815) (DUF815) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGGCCGGCCCCCTCAATACGGCTCGAACTTTACCTGGGTGCTGCAGC
Internal bar code:TCCAGTTGGCTATGCGTGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:5018
LEAP-Seq percent confirming:78.0488
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGGCGATGTGTTCTTCA
Suggested primer 2:GGTGGATGCGGTGGAAATTG