Insertion junction: CLIP2.022837_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022837
Chromosome:chromosome 13
Location:1193611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569850 AMT4,AMT1D Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTGGTGGCCTGGCCGGCCTGGCTGGCTGCATCATGGTGGGCCCCCGCA
Internal bar code:GATTAGCTCTCAGCGTAGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3175
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACAACGCTCCTACCTG
Suggested primer 2:GGCTTCGCTTATGGCATTGG