Insertion junction: CLIP2.022838_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022838
Chromosome:chromosome 6
Location:4865005
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280420 PAP6 (1 of 2) PTHR12271:SF40 - POLY(A) RNA POLYMERASE GLD2; Class-II RNA nucleotidyl transferase 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCGTGCACACAGGAGCGGACGGCTGCGGAGGACGAGCGTGTGCAGCG
Internal bar code:GCCACGCTTGCGGGCCTATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4587
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACGCGAACACAAGTACT
Suggested primer 2:CGACATGTCGTGAGTAGGGG