Insertion junction: CLIP2.022849_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022849
Chromosome:chromosome 1
Location:7754681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054600 (1 of 8) IPR000157 - Toll/interleukin-1 receptor homology (TIR) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAGACGTGGACGGCGTGACACGGGAGCTGATGGGATTGGGGGGCTTC
Internal bar code:GTTCGTTATAGGCTCCTTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1200
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCTGGAGTGGAAGGAAT
Suggested primer 2:CCAGGGTGGAGTTTGAGTCC