Insertion junction: CLIP2.022851_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022851
Chromosome:chromosome 8
Location:3875394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381800 (1 of 2) 5.3.3.2 - Isopentenyl-diphosphate Delta-isomerase / Methylbutenylpyrophosphate isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCCCTGTATCTCACTCCATAACTCCACACCGCATCCCAACGCCCAGC
Internal bar code:TTTACTAATTTCCGGGTCCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:870
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCCTTACAAACGCACGC
Suggested primer 2:TCCACATGAACGGCTAACCC