Insertion junction: CLIP2.022858_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022858
Chromosome:chromosome 6
Location:3548386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278123 VPS39 (1 of 781) IPR000104 - Antifreeze protein, type I; Subunit of VPS-C complex CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCGTACCGGGGCGTGCTCGTGACCATGCCCATTGGCTGCCGCATGGAG
Internal bar code:AGCAACTATCGGTCGATATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2936
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTCAAGCCCAAGAGCTA
Suggested primer 2:CCACCACCACCAACAACAAC