Insertion junction: CLIP2.022860_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022860
Chromosome:chromosome 4
Location:2366655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221150 GT90-5,GT90F5 GT90 family protein 5; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGCCGAGGCCAGTAAGCTAGCTCCAGTAGCAGCCCCAATGGTCCAACA
Internal bar code:TATTTCGTTCAAGTTTCCGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:286
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGATGACAACGCGTGAGT
Suggested primer 2:CCTCCCCAGTAACTCCGGTA