Insertion junction: CLIP2.022863_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022863
Chromosome:chromosome 7
Location:5619188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352300 (1 of 3) 2.1.1.200 - tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase / TrMet(Xm32) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGCTGGTGCCGTGGAAAGTAAAAAGGGACGGACACCCATGCATGCC
Internal bar code:TATATGGCGGAGCAGGTTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1785
LEAP-Seq percent confirming:83.7209
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATACGCTGCCTTGCAAC
Suggested primer 2:ACAGACATGAGGAACGGCAG