Insertion junction: CLIP2.022876_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022876
Chromosome:chromosome 1
Location:4170946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027900 (1 of 1) K17338 - receptor expression-enhancing protein 1/2/3/4 (REEP1_2_3_4); similar to HAV22 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCTAGGCATGGCCTTGCTAGGCATCTCTCACACACCTGCCCGCGCCCG
Internal bar code:GTCTAGTATATCTTGGCTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3154
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCCTACTGCCAGGTCAC
Suggested primer 2:ATGGGGTTCTTCATGTGCGT