Insertion junction: CLIP2.022878_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022878
Chromosome:chromosome 13
Location:917619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567901 (1 of 1) PTHR15451//PTHR15451:SF19 - FAMILY NOT NAMED // ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCGTCTCACACGGCGATGCCGTCGTTCGCAGTGACCCCTCTGCTCGG
Internal bar code:AGTGACAAGTGCAGCACCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2352
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAAAAGCTGGGACTGGTC
Suggested primer 2:GGATATGCTTGCTGTTGGCG