Insertion junction: CLIP2.022880_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022880
Chromosome:chromosome 5
Location:2978313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800568 (1 of 2) PTHR10799:SF573 - TRANSCRIPTION TERMINATION FACTOR 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGACACACAGCAATGAAACGCGCTCCTTTGCATGTGGCACACACCAACT
Internal bar code:CGTTGTCGCGGAGTTATAACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:130
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGCTGATTGAGTGGCA
Suggested primer 2:CCTACCGAATACCGAGCGTC