Insertion junction: CLIP2.022885_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022885
Chromosome:chromosome 1
Location:5583051
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039800 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCCGGCCGTGCCATCGGGCTGGCTGCCGTGGTGGTTGCAGCGCGGGG
Internal bar code:GGGGGATCAGAGGCAAATAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1486
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGCACTGCAACCGAATG
Suggested primer 2:GCCCTGTCGCAGCATATACT