Insertion junction: CLIP2.022897_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022897
Chromosome:chromosome 3
Location:1450108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151150 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTGGCGGCGTTCGCTACAAAGGCACCAGGCGGGGCGGTGGAGGAGAG
Internal bar code:GTTGGTAGATCTCCGTGGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1927
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGAACTACTTGGCCATC
Suggested primer 2:CTTCTGATCATGCAGCGCAC