Insertion junction: CLIP2.022905_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022905
Chromosome:chromosome 12
Location:6048170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534850 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGCAACTTGCGTGCTCGAATGGCCTCGGGCGGCGTGCAGCAGACAT
Internal bar code:TAGACACATGACTATAGACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1174
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGACCAAGTACCTGACCG
Suggested primer 2:ATGACCGAGACCACAAGCTG