Insertion junction: CLIP2.022916_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022916
Chromosome:chromosome 16
Location:4943777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686550 (1 of 1) PF12400 - Vaculolar membrane protein (DUF3661) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTCAGCGGCACGGCGGCAGCAACGAATGCGATACACCCGCTCGTCGG
Internal bar code:CTGATCTATAGAACATATAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1323
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGGTCTCTTCACCCCTA
Suggested primer 2:ACGTCGGCACTTCACTTCAT