Insertion junction: CLIP2.022921_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022921
Chromosome:chromosome 12
Location:4507838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g520850 (1 of 1) K15153 - mediator of RNA polymerase II transcription subunit 31 (MED31, SOH1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAGACGTAAACCGACACGGAGCATGCCCACGTCCTCTTGTGCAGAGC
Internal bar code:AAGGCCGGTATGAAAGTAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3748
LEAP-Seq percent confirming:96.0526
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCAGCGCAGGACTTGGAA
Suggested primer 2:GGGCTGTACACGGGTAAACA