Insertion junction: CLIP2.022929_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022929
Chromosome:chromosome 3
Location:6981076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198500 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCGCTGCTGCTCAAGCCGGTCTGCTAGCTCTGTCGCAAATGCGTCCA
Internal bar code:AAGCGCGGATCGGTAGTGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4420
LEAP-Seq percent confirming:8.16327
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTCAACATCGTTGCTGA
Suggested primer 2:CTGCTGCGGGTATGACATGA