Insertion junction: CLIP2.022932_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022932
Chromosome:chromosome 1
Location:4170264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027900 (1 of 1) K17338 - receptor expression-enhancing protein 1/2/3/4 (REEP1_2_3_4); similar to HAV22 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGAGGCCAGCGTGTCCAATGCCACGAAGGCGCCCGCGAAACCATGTC
Internal bar code:GATTAACTACAGAAGAGTCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1659
LEAP-Seq percent confirming:95.3488
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGTTGTCCCGTCACATA
Suggested primer 2:CGCGCACATAGGTGTTCATG