Insertion junction: CLIP2.022939_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022939
Chromosome:chromosome 11
Location:2066103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467757 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCTCCTGCACCTCCTCGACGCTACCATGCCCAGCACCCGCTGCCCCC
Internal bar code:TTATTAACCCCCAGGGGCGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2086
LEAP-Seq percent confirming:93.617
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACAGCAGCAACAACAGT
Suggested primer 2:CCTCGTCCTCATCATCGTCG