Insertion junction: CLIP2.022940_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022940
Chromosome:chromosome 5
Location:1066520
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247851 CEP2 Cysteine endopeptidase; (1 of 2) 3.4.22.14 - Actinidain / Actinidin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGGCCTAGGCGCTTGGCCGCGAACTCCTCCCACGTCTCATCCGCGTA
Internal bar code:TTTACGCGATAGGATCATTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:331
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCCTTAGGCCTAACCCT
Suggested primer 2:AGGAAATGCGAGAAAGGGGG