Insertion junction: CLIP2.022959_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.022959
Chromosome:chromosome 6
Location:3946679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278198 (1 of 1) 1.14.11.33//4.2.99.18 - DNA oxidative demethylase / Alkylated DNA repair protein // DNA-(apurinic or apyrimidinic site) lyase / Phage-T4 UV endonuclease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACCAGATAGGTGGGCTGCCACTTCCCAGCCGCTCTTACCGCGACGCC
Internal bar code:TCATTGGGGCGTTATTCGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3366
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAATCCCATTCACCTCA
Suggested primer 2:GCGCCTCATATCACTCTGCT