Insertion junction: CLIP2.022988_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022988
Chromosome:chromosome 4
Location:1071380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g216300 (1 of 1) K11878 - proteasome assembly chaperone 4 (PSMG4, PAC4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCTGCAGGGTGGCGCCAACGCGGGGCCGGGCTCAGAGTCCGCGTCA
Internal bar code:AATGCGGGTACTCGTAGGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1491
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCTCCGACGGCTTGTAG
Suggested primer 2:CAAGATTCGGCGGCATCAAG