Insertion junction: CLIP2.022989_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022989
Chromosome:chromosome 17
Location:2745373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g717800 NUP93 Nucleoporin 93; (1 of 1) K14309 - nuclear pore complex protein Nup93 (NUP93, NIC96) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGATGTTGAGTGATGGGTAGCCGGGGGCTGCGGCCCTTGAATCTCCGCA
Internal bar code:TGCCTTACGGCGGTTACCTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1690
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCACATGAAGTCCTCAA
Suggested primer 2:TGCTGTGCCATTTTGACTGC