Insertion junction: CLIP2.023007_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023007
Chromosome:chromosome 13
Location:4909502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605386 (1 of 9) PTHR11258//PTHR11258:SF11 - 2-5 OLIGOADENYLATE SYNTHETASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGGCCGAGACTGACATACGATTGCAGCCGGCCCCAGAAATCAGCAAT
Internal bar code:TCTAGGCAACAGTGTGGTCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5278
LEAP-Seq percent confirming:48.6957
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:59
LEAP-Seq n unique pos:115

Suggested primers for confirmation by PCR

Suggested primer 1:TATGTGCGTGATGCTGGTGT
Suggested primer 2:CTTCCACAACCGTGCAACAG