Insertion junction: CLIP2.023011_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023011
Chromosome:chromosome 12
Location:4149969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517451 (1 of 1) PTHR31773:SF9 - METACASPASE-1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACGAGCTGAACCGCATGATGGTCCAGCCGCTCATGCCCAACGTGACG
Internal bar code:ATATAAGAGATTCTGACCGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1902
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCGGACAGCTTATTGGT
Suggested primer 2:GGTGACTCGCTGTTCTTCCA