Insertion junction: CLIP2.023014_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023014
Chromosome:chromosome 12
Location:7797540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554051 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGAAGTGTCCGCACCACAGAAGCCATGTTAGGCCGGTGGCGGGGGTC
Internal bar code:GGTTGTGAGTTCGTGATAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1159
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GGACGAATGCGGTATAGCCA
Suggested primer 2:ATCACAGCATCGGGTCCTTG