Insertion junction: CLIP2.023020_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023020
Chromosome:chromosome 7
Location:1590334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325101 (1 of 2) PTHR30336 - INNER MEMBRANE PROTEIN, PROBABLE PERMEASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCACCGCCTCGTACACACCGCACGTGGGCTGGTACGCCGCCCCGCTG
Internal bar code:ATGATCAAAGAGGAGACTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3411
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGGAAATGTGCGTTGCC
Suggested primer 2:CCGCACGATAAACTGCATGG