Insertion junction: CLIP2.023036_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023036
Chromosome:chromosome 7
Location:2344562
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328226 (1 of 6) IPR000817 - Prion protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCCATGCGCCCCTTCTTTCTCCCCGGGCCCCCACCCTTTACTTTGGG
Internal bar code:CTATGCCTATGTGTATAAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:787
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTGGTTGCAACAGCCAG
Suggested primer 2:GTGACTGCTGTGGTTGCATG